Loading…
GCC 2017 has ended
The 2017 Galaxy Community Conference (GCC2017) is being held in Montpellier, France, 26-30 June.  GCC2017 will include keynotes and accepted talks, poster sessions, demos, birds-of-a-feather meetups, exhibitors, and plenty of networking opportunities. There will also be three days of pre-conference activities, including hackathons and training. If you work in data-intensive biomedical research, there is no better place than GCC2017 to present your work and to learn from others.

The full printed program is also available.
View analytic
Friday, June 30 • 17:36 - 17:42
Parsec: Intergalactic DevOps and Analysis Automation

Sign up or log in to save this to your schedule and see who's attending!

Slides

Authors

Eric Rasche 1

1 : Center for Phage Technology, Texas A&M University  (CPT)


Abstract
Parsec is a new tool which allows users to build simple command line pipelines based on bioblend functions, all without writing a single line of python. Perfect for everything from quick access to administrative functions (adding / removing users from groups), all the way to more complex tasks (filtering a list of histories and doing some operation on all of them.) Parallel projects exist for the python-chado and python-apollo libraries. We have experimented with generating Galaxy tools in addition to the command line tools.

Presenters
avatar for Eric Rasche

Eric Rasche

Sysadmin / Bioinformatician, Center for Phage Technology @ Texas A&M University



Friday June 30, 2017 17:36 - 17:42
Einstein Auditorium Le Corum, Level 0

Attendees (9)