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GCC 2017 has ended
The 2017 Galaxy Community Conference (GCC2017) is being held in Montpellier, France, 26-30 June.  GCC2017 will include keynotes and accepted talks, poster sessions, demos, birds-of-a-feather meetups, exhibitors, and plenty of networking opportunities. There will also be three days of pre-conference activities, including hackathons and training. If you work in data-intensive biomedical research, there is no better place than GCC2017 to present your work and to learn from others.

The full printed program is also available.
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Thursday, June 29 • 11:50 - 12:10
Galaxy Genome Annotation Project: Galaxy and GMOD for Annotation, Teaching, and Genomic Databases

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Slides @ F1000

Authors
Eric Rasche, Center for Phage Technology, Texas A&M University (CPT)
Björn Grüning, Department of Computer Science [Freiburg]
Nathan Dunn, Lawrence Berkeley National Laboratory (LBNL)
Anthony Bretaudeau, BIPAA/GenOuest


Abstract
GMOD projects have long provided powerful open-source tools to the bioinformatics community, but have historically been hard to configure and integrate. The Galaxy Genome Annotation (GGA) group provides a highly integrated set of Dockerized GMOD projects allowing for more widespread use of these tools in new contexts for system administrators wishing to deploy the suite. Our projects include maintenance of the Galaxy-Apollo bridge tools, Galaxy-Tripal and Chado tooling, and containerized versions of various GMOD projects which are configured to easily integrate with the rest of the suite.
This talk will explore the use of this suite in the context of a real life use-case, an undergraduate phage annotation course. We will cover the GGA suite as well as various integrations, workflows, training materials, and tools that were built and made available in support of GGA.

Presenters
avatar for Eric Rasche

Eric Rasche

Sysadmin / Bioinformatician, Center for Phage Technology @ Texas A&M University



Thursday June 29, 2017 11:50 - 12:10
Einstein Auditorium Le Corum, Level 0

Attendees (22)